Fast tunable lasers in radio-over-fiber access networks

The authors present a novel concept of employing optical wavelength packet switching (WPS) in radio-over-fiber (RoF) access networks. The Central Station is equipped with a fast tunable laser (TL), which is externally modulated with a data signal upconverted to a radio frequency. The information transmitted over the network is encoded onto different wavelengths depending on the destination base station (determined by an optical band-pass filter at that BS). Routing of traffic could be performed on a packet-by-packet basis. In such a system dynamic bandwidth allocation could be realised by varying the time the TL transmits on a particular wavelength, depending on the amount of data that needs to be sent from/to the BS. The feasibility of employing TLs in the realisation of such a system is verified by building a basic WPS RoF system. The measurements of the cross-channel interference due to the TL wavelength instability and drift are also presented. No power penalty was observed due to switching of the laser, suggesting that RoF systems based on TLs are a feasible solution to the last mile proble

Indo-Pacific biodiversity of coral Rreefs: deviations from a mid-domain model

Understanding the nature and causes of global gradients in species richness is a perennial ecological problem, and recent work has highlighted the need to assess these gradients relative to an appropriate statistical expectation. This paper examines latitudinal and longitudinal gradients in species richnesses of corals and reef fishes in the Indo-Pacific domain and compares them with gradients predicted by a mid-domain model in which geographic domains are located at random between the latitudinal and longitudinal boundaries of this region. We test for significant differences between observed and predicted species-richness patterns, and we identify regions that are enriched or depauperate in species, relative to expectation. In addition, we move beyond previous mid-domain analyses by directly comparing observed spatial distributions of geographic ranges with those predicted by a mid-domain model. This comparison indicates precisely how species-richness anomalies are produced by nonrandomness in the distribution of species ranges. For both corals and fishes, large and statistically significant differences exist between observed latitudinal and longitudinal species-richness gradients and those predicted by mid-domain models. Longitudinally, species richness is markedly higher than predicted along the African coast and, to a lesser extent, within the Indo-Australian Archipelago (IAA), and it is markedly lower than expected in the eastern Pacific. Latitudinally, species richness becomes increasingly higher than predicted as one moves from the equator to the tropical margins; then it becomes sharply lower than predicted beyond the tropics. Unexpectedly, differences between observed and predicted spatial distributions of range endpoints and midpoints reveal a pattern of nonrandomness that is highly congruent with the hypothesis that gyres in the Indian and Pacific Oceans, with the IAA forming a porous boundary between them, have a major influence on Indo-Pacific species-richness patterns. Our analyses indicate that the perspective offered by a focus on explaining nonrandomness in the location of geographic ranges (rather than explaining why species numbers vary in space) is likely to dramatically alter our assessments of alternative explanations for global species-richness gradients

Characterization of frequency drift of sampled-grating DBR laser module under direct modulation

The authors demonstrate the drift in frequency of a static sampled-grating distributed Bragg reflector (SG DBR) laser module when it is subjected to direct modulation. The magnitude of drift and its settling time is characterized as a function of the index of modulation. Results show that when the directly modulated SG DBR is optically filtered, as in a dense wavelength- division- multiplexed system, a power penalty of 6.7 dB is incurred in comparison to the unfiltered case

A unified model explains commonness and rarity on coral reefs

Abundance patterns in ecological communities have important implications for biodiversity maintenance and ecosystem functioning. However, ecological theory has been largely unsuccessful at capturing multiple macroecological abundance patterns simultaneously. Here, we propose a parsimonious model that unifies widespread ecological relationships involving local aggregation, species-abundance distributions, and species associations, and we test this model against the metacommunity structure of reef-building corals and coral reef fishes across the western and central Pacific. For both corals and fishes, the unified model simultaneously captures extremely well local species-abundance distributions, interspecific variation in the strength of spatial aggregation, patterns of community similarity, species accumulation, and regional species richness, performing far better than alternative models also examined here and in previous work on coral reefs. Our approach contributes to the development of synthetic theory for large-scale patterns of community structure in nature, and to addressing ongoing challenges in biodiversity conservation at macroecological scales

Scoping assessment of free-field vibrations due to railway traffic

The number of railway lines both operational and under construction is growing rapidly, leading to an increase in the number of buildings adversely affected by ground-borne vibration (e.g. shaking and indoor noise). Post-construction mitigation measures are expensive, thus driving the need for early stage prediction, during project planning/development phases. To achieve this, scoping models (i.e. desktop studies) are used to assess long stretches of track quickly, in absence of detailed design information. This paper presents a new, highly customisable scoping model, which can analyse the effect of detailed changes to train, track and soil on ground vibration levels. The methodology considers soil stiffness and the combination of both the dynamic and static forces generated due to train passage. It has low computational cost and can predict free-field vibration levels in accordance with the most common international standards. The model uses the direct stiffness method to compute the soil Green's function, and a novel two-and-a-half dimensional (2.5D) finite element strategy for train-track interaction. The soil Green's function is modulated using a neural network (NN) procedure to remove the need for the time consuming computation of track-soil coupling. This modulation factor combined with the new train-track approach results in a large reduction in computational time. The proposed model is validated by comparing track receptance, free-field mobility and soil vibration with both field experiments and a more comprehensive 2.5D combined finite element-boundary element (FEM-BEM) model. A sensitivity analysis is undertaken and it is shown that track type, soil properties and train speed have a dominant effect on ground vibration levels. Finally, the possibility of using average shear wave velocity introduced for seismic site response analysis to predict vibration levels is investigated and shown to be reasonable for certain smooth stratigraphy's.Ministerio de Economía y Competitividad - BIA2016-75042-C2-1-

Larval Survival of Fuller's Rose Weevil, Naupactus cervinus, on Common Groundcover Species in Orchards of New Zealand Kiwifruit

Fuller's rose weevil, Naupactus cervinus (Boheman) (Curculionidae: Entiminae), is an important quarantine pest of New Zealand kiwifruit exported to Asian markets. Both adults and larvae are considered to be polyphagous. In this study, the survival of larval N. cervinus was estimated on common groundcover species of kiwifruit (Actinidia spp.) in the Bay of Plenty, the main region in New Zealand where kiwifruit is grown. The botanical composition of groundcover in commercial kiwifruit orchards, characterised by survey, was dominated by ryegrass (Lolium perenne), with white clover (Trifolium repens), creeping buttercup (Ranunculus repens), wild strawberry (Duchesnea indica) and broadleaf dock (Rumex obtusifolius) in lower abundance. Survival to mature larvae or adult was relatively low (·11%) for N. cervinus introduced as neonates to field plots or potted ryegrass, white clover and broadleaf dock. White clover was a more favourable host for survival to adults than ryegrass. This study suggests that increased survival of N. cervinus larvae may occur where white clover and large dock plants are abundant, but that survival is likely to be highly variable because of the heterogeneous availability of preferred host plants and host plant quality. These data suggest that larval polyphagy is a strategy that enables N. cervinus to persist at low densities in kiwifruit orchards despite variation in the quality and diversity of groundcover

A higher order perfectly matched layer formulation for finite-difference time-domain seismic wave modeling

We have developed a higher order perfectly matched layer (PML) formulation to improve the absorption performance for finite-difference time-domain seismic modeling. First, we outlined a new unsplit “correction” approach, which allowed for traditional, first-order PMLs to be added directly to existing codes in a straightforward manner. Then, using this framework, we constructed a PML formulation that can be used to construct higher order PMLs of arbitrary order. The greater number of degrees of freedom associated with the higher order PML allow for enhanced flexibility of the PML stretching functions, thus potentially facilitating enhanced absorption performance. We found that the new approach can offer increased elastodynamic absorption, particularly for evanescent waves. We also discovered that the extra degrees of freedom associated with the higher order PML required careful optimization if enhanced absorption was to be achieved. Furthermore, these extra degrees of freedom increased the computational requirements in comparison with first-order schemes. We reached our formulations using one compact equation thus increasing the ease of implementation. Additionally, the formulations are based on a recursive integration approach that reduce PML memory requirements, and do not require special consideration for corner regions. We tested the new formulations to determine their ability to absorb body waves and surface waves. We also tested standard staggered grid stencils and rotated staggered grid stencils

Copy number variation analysis in the context of electronic medical records and large-scale genomics consortium efforts

The goal of this paper is to review recent research on copy number variations (CNVs) and their association with complex and rare diseases. In the latter part of this paper, we focus on how large biorepositories such as the electronic medical record and genomics (eMERGE) consortium may be best leveraged to systematically mine for potentially pathogenic CNVs, and we end with a discussion of how such variants might be reported back for inclusion in electronic medical records as part of medical history